Insertion junction: CLIP2.050118_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050118
Chromosome:chromosome 6
Location:5561574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800698 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTCTTGGGGGAACGTGTGCCGCACCTCTTGCCGTGCTGCTGCCGCTGC
Internal bar code:CCGGCATTTAGGTGATCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGCAGCAGTCTGACCT
Suggested primer 2:GCTCGCCACGATGATCAAAC