Insertion junction: CLIP2.050132_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050132
Chromosome:chromosome 3
Location:2431955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158850 (1 of 1) PTHR24413:SF79 - BTB/POZ DOMAIN-CONTAINING PROTEIN 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATATCTTGAACTCAACCAAGGATGCGTGCATGGATGCGTGCGATGAAG
Internal bar code:TGGCCCTGTTAGTCATTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6034
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTGTGGAAGAAAGCCG
Suggested primer 2:GCTGGAGCTGGAGTACGTTT