Insertion junction: CLIP2.050132_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050132
Chromosome:chromosome 3
Location:2432098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158850 (1 of 1) PTHR24413:SF79 - BTB/POZ DOMAIN-CONTAINING PROTEIN 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGGCCAGCACGCGCGGGTCGGTGGTGCGGCCGGTCGGGCTGCTGG
Internal bar code:TGGCCCTGTTAGTCATTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1643
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGAGCTGGAGTACGTTT
Suggested primer 2:ATCCCTGTGGAAGAAAGCCG