Insertion junction: CLIP2.050143_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050143
Chromosome:chromosome 3
Location:6490953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193700 (1 of 1) PTHR10992//PTHR10992:SF749 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGTGCCTTGGTCCACCGCGTTCGCTGGTCGTTTCAACTTTCCGCTC
Internal bar code:GTCCCTACGCAGACCACTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:67.7966
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGAAGTGGGTCGAACT
Suggested primer 2:CGGTGCAATGCTCGTGTATG