Insertion junction: CLIP2.050144_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050144
Chromosome:chromosome 6
Location:2668825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGTGCATGTATGGTTGGGAGCGCCAATAAGCAAGTGGATGTGTGTGA
Internal bar code:CGTTTAGTAATTCCAGCCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTGTGGGTCCCATGTC
Suggested primer 2:CATGTAGCTGTCATTGCGCC