Insertion junction: CLIP2.050144_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050144
Chromosome:chromosome 6
Location:2668840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGCAGTTCTACAACTGTGCCGACGTCATGATTGCACCGGCCACCTCC
Internal bar code:TAAAGTGCCAAAGGGAGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTAGCTGTCATTGCGCC
Suggested primer 2:CAGTCTGTGGGTCCCATGTC