Insertion junction: CLIP2.050149_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050149
Chromosome:chromosome 13
Location:3764065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGTTCGTTGACGGCGACTTCAACGACGCGCCGTACAGCCAGCAGCT
Internal bar code:TGCAGGTAACACAGTGCCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGTTGAGGTGGAGGG
Suggested primer 2:AGCGATCCAAAGACCACCTG