Insertion junction: CLIP2.050158_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050158
Chromosome:chromosome 17
Location:3617674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725250 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGACCGTGTACAGCTATCCGGCGATGGCGGTCTGGCACAACCTCCTCA
Internal bar code:GTGTTGGATTCACTCGGGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2433
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCAGGAGGAGGTGGAAG
Suggested primer 2:ACGGCTCCAAAGAGTTCCTG