Insertion junction: CLIP2.050159_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050159
Chromosome:chromosome 17
Location:3825377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGCCTGCCGCACATGCCACGTGCCGGCTGTGACATTCTGCAATTA
Internal bar code:TTGAGAGCGTATTGATTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTGGAGGCTGGTAACG
Suggested primer 2:CGTGGTCCTGAGCAGTTTCT