Insertion junction: CLIP2.050160_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050160
Chromosome:chromosome 3
Location:8381462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198800 (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATTGCAGGCGGGTTAAACTGGCCCGTTGCGTCCCTGGGGTGGCGCGT
Internal bar code:TGGTATGCATTGACGAGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGTAGTGGGTCACTGG
Suggested primer 2:CACAAAGCTCACCTCGGTCT