Insertion junction: CLIP2.050160_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050160
Chromosome:chromosome 3
Location:8381469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198800 (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTGTTGTTTTACGCAACTGTAGGTCAGCCATGGAGCGAGGAGGAGCA
Internal bar code:GTCACAGGCCGAATGCGTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAAGCTCACCTCGGTCT
Suggested primer 2:CAGCAGTAGTGGGTCACTGG