Insertion junction: CLIP2.050162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050162
Chromosome:chromosome 12
Location:261671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485300 CSV6 Chlamydomonas-specific family protein intron
lncRNA_TCONS_00238996 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTTGGGGTTGTGCCAGCAGGTGCCACGGACGACACGAACACGTCTGG
Internal bar code:CGATTAGTCGGGTGACTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTACCTACCCAGCCTC
Suggested primer 2:GAGCTGGCGCAAATCTTAGC