Insertion junction: CLIP2.050167_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050167
Chromosome:chromosome 14
Location:4097560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633700 (1 of 6) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCCTACGCCGCCTAGAGGGGGCGGGAACGCAGGCGGCGACTGGTTG
Internal bar code:CAAGATGACTCAGAAGGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATGGGGCCCACACATTA
Suggested primer 2:AGGATGAGGAGGAGGACCAC