Insertion junction: CLIP2.050168_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050168
Chromosome:chromosome 8
Location:3149461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376250 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCCGTATGATGAGGAGCCGTATGATGAGGAGCAGATACACAAGCC
Internal bar code:GTAGCGGTGGTGGCTCCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5509
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTGAGCCCAACCCAAG
Suggested primer 2:CAGCTGCTGATGAAGAACGC