Insertion junction: CLIP2.050172_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050172
Chromosome:chromosome 17
Location:5928092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741950 BBS1 Bardet-Biedl syndrome-1 associated protein; (1 of 1) K16746 - Bardet-Biedl syndrome 1 protein (BBS1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTCCTCACCGATGGCCAGGTGAGCATGTCGTCCCGTTCGCCTATGC
Internal bar code:GCGCTTCTTAGCTTGTAAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGTTCTTCGGCGCAAG
Suggested primer 2:TTGCAGTCTAGGCCAAAGGG