Insertion junction: CLIP2.050174_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050174
Chromosome:chromosome 3
Location:3931127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171100 (1 of 77) IPR001623 - DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGGAGGCGGCCCAGGAATCTCGCCCTGTGCAAGGCGTGCCGACCCG
Internal bar code:AGCGGTTTTAACTTGGGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:83.1579
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTCTGGGTATCGAGCCT
Suggested primer 2:GGGAGGCAAGGGAGTTACAC