Insertion junction: CLIP2.050180_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050180
Chromosome:chromosome 6
Location:1992411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265000 HTR13 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCACACCGCCGGTGGCGGGGGTCTTGCGAGCGGCCTTGGTGGCCAG
Internal bar code:AGACAAGGCTGAGGACTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2661
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCCCCACAGCCATCGAC
Suggested primer 2:TGTATCCTGTGCCGTTGCTT