Insertion junction: CLIP2.050184_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050184
Chromosome:chromosome 16
Location:4828533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687400 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCTGAACCTGGACTTGGCGGGGCGAAGGCTACGGCAGCACACAAA
Internal bar code:GGATGGTAGGACCTGGGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3592
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCCTAGACGGCAGAAA
Suggested primer 2:TCTACCAGCTAGCTCAGGCA