Insertion junction: CLIP2.050188_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050188
Chromosome:chromosome 17
Location:5628148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740000 (1 of 102) PF01753 - MYND finger (zf-MYND) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCACCTGCTGGACTACGCCCCGCCCGAGCTGGCCGCGGCGCTGTGGGG
Internal bar code:GCTTCTGCGTGCATGTTCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:406
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTACAACGGCATAAGCGC
Suggested primer 2:CGTCTAGTGTGCTGACGGAG