Insertion junction: CLIP2.050192_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050192
Chromosome:chromosome 3
Location:4198573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173500 (1 of 1) PTHR23184//PTHR23184:SF9 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 14 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTGACCGGCTGCAGCGGGAGCGGGAGTTGGATGAACTGGAGCGGGA
Internal bar code:CAGGTTAGGTTAGGGTATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGTCTTCACTGTCCGG
Suggested primer 2:CCTTGTGCTCTCTGACACGT