Insertion junction: CLIP2.050196_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050196
Chromosome:chromosome 9
Location:2447009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393400 VTE4 Tocopherol O-methyltransferase/gamma-tocopherol methyltransferase; (1 of 1) 2.1.1.95 - Tocopherol O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCATTACAGCTGCCCCTGTGCCAGCCGCTGCTGCTGCCTTGATAGGC
Internal bar code:AATGCCGGCGGATAGAGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCGATGCAATGGCCTG
Suggested primer 2:GAGGGAAGCAGTGTTTCCGA