Insertion junction: CLIP2.050204_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050204
Chromosome:chromosome 9
Location:2471031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAAATGTCTGATGTCCCAAGCGAATCTGGGCCGCTGCCAGCACATA
Internal bar code:AGTACTGCGTGAGATGTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGGGGACTCTGGGTTG
Suggested primer 2:CTGCAGCATCGTTAAGCGTC