Insertion junction: CLIP2.050208_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050208
Chromosome:chromosome 12
Location:3325806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498700 CPLD13 Conserved in the Plant Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGATCGCATGCATTCCTCCCATGCACCCTGCCGTCGTCCCAGCCATT
Internal bar code:ATGCCTGTTTCAGCGACAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:92.233
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCACAGTGCTCAAAACC
Suggested primer 2:TGGACACCTCTCAAACGCTC