Insertion junction: CLIP2.050209_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050209
Chromosome:chromosome 6
Location:6705208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCCCAAACCAGAGTTCCCATCAGAAAGCTCGCACACGCTTGGGCAA
Internal bar code:TAATATATTATTGACGTTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2263
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTGTTAGGGTCCAGCA
Suggested primer 2:CCAACACGAGAGACGACACA