Insertion junction: CLIP2.050211_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050211
Chromosome:chromosome 12
Location:1101922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491250 (1 of 1) IPR003615//IPR010995 - HNH nuclease // DNA repair Rad51/transcription factor NusA, alpha-helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGTGCCTGAAGTACGTGCGCTGTCAATCCTATGGGGAAGGAGCACGC
Internal bar code:GGCTGGACACCACTTTTCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGATGACTTCAAGGCG
Suggested primer 2:CACTCGAACTGGTGTCGTCA