Insertion junction: CLIP2.050214_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050214
Chromosome:chromosome 12
Location:5781528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532750 EEP8 (1 of 1) K10772 - AP endonuclease 2 (APEX2); Endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGGTGCCGTGGGCAGGCCGCAGCTGCCGCCGCGCCCTGGGTTGGGC
Internal bar code:ATTTCGTTCGAAGACGTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGGTCCTGGATCTGCC
Suggested primer 2:GCGCAGGATATCATGGTGGA