Insertion junction: CLIP2.050223_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050223
Chromosome:chromosome 10
Location:2760478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCGCACCCCGCAGCTCCTGCTCTCCCCCCGCACCCACCCCTCCTGCA
Internal bar code:GGATTTGCATACTTAGATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCTCCCCTCTTCC
Suggested primer 2:CGGTACTTGAGGTCAGGCAG