Insertion junction: CLIP2.050240_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050240
Chromosome:chromosome 8
Location:4055449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGGATACAGTCCTTCCGCCCGCGCGAGCCTGGTTGCCCTGGCGCTG
Internal bar code:GGTATATAAATACCGAGTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGCGGTTGATTCATAC
Suggested primer 2:GTTGCCAGTACCCTCTAGGC