Insertion junction: CLIP2.050247_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050247
Chromosome:chromosome 6
Location:1639174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261900 FAP71 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 71 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTCCTTTGCTCCAGGCGCTCCAAGCAGGGAGGCTGTTTTTCAGGAAG
Internal bar code:ATTCACTCTACCGGTCTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGTTGTGTTTGGAGTC
Suggested primer 2:GCTACGACCGCTGTTATCGA