Insertion junction: CLIP2.050248_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050248
Chromosome:chromosome 16
Location:6681400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCATGCAAGCGCGAGCTAGGTACCGTACTGCTGGCGGCATTGCAAAG
Internal bar code:ATGAAAAGGATTGCCAATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACAACAGCAGCATGTG
Suggested primer 2:TCGCTGGTTGGCAGGAATAG