Insertion junction: CLIP2.050248_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050248
Chromosome:chromosome 16
Location:6681404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACATCTCCTGCCAAAGTTCTCACCACCACCTTGCGCGTTGTGTGCCC
Internal bar code:ACTCATATTTCTACGTTCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGGTTGGCAGGAATAG
Suggested primer 2:AGCAACAACAGCAGCATGTG