Insertion junction: CLIP2.050263_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050263
Chromosome:chromosome 1
Location:1412546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007500 NSS1 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGGCGTAATGGTGGCGCGTCGGATTCCAATATCCGCTGGGTCTCCC
Internal bar code:ACTCATGCTAACTCCCGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:60.9756
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGACACTGTGGCAGCAG
Suggested primer 2:AAGTGCTGGGAATCTGGGTG