Insertion junction: CLIP2.050266_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050266
Chromosome:chromosome 13
Location:3697219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) 3'UTR
Cre13.g801562 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGCAGGTTATGCAAGGTGCTGACCAATTTAAGTTGGCTTGCTGCGT
Internal bar code:CAAATGCTTCTGACCCTGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2767
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTGACTTTGTCTGCCGG
Suggested primer 2:ATTGCCACCTATGGTTGCGA