Insertion junction: CLIP2.050266_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050266
Chromosome:chromosome 13
Location:3697229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) 3'UTR
Cre13.g801562 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATACCGTACGTTGATCTGACACACGTGTACGCTTCACACTCAAGTAA
Internal bar code:TTGAAGGCATAGAATTGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3818
LEAP-Seq percent confirming:84.0708
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCACCTATGGTTGCGA
Suggested primer 2:AGACTGACTTTGTCTGCCGG