Insertion junction: CLIP2.050278_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050278
Chromosome:chromosome 13
Location:2113027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577352 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGGCCGCCACTGCCCGCACCCTCGCCTCAAGCCACCGCCGCAACCA
Internal bar code:TCGCGGTGGCCCTCCTCTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2404
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACGCCTATAACAGCTGC
Suggested primer 2:AGCTCCTGGGATGTATGGGT