Insertion junction: CLIP2.050281_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050281
Chromosome:chromosome 15
Location:1653641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750747 NCL38,OPR110 Nuclear Control of chloroplast Like 38; (1 of 1) IPR011632//IPR013584//IPR016024 - Domain of unknown function DUF1601 // RAP domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGGGCGGGCGGTGGCGGCGGTGGTGGCGGCGGCAGGGCGCGGGACC
Internal bar code:CGATATGATAGCGTGTATTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:80.4878
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGGCTGTTAGACACGT
Suggested primer 2:AAGCCGCGAAATCAGTCTCA