Insertion junction: CLIP2.050288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050288
Chromosome:chromosome 8
Location:1392835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCAACACTGCGGAACTGTGTGGGTAAGTCTGGCACAGGTTCAGTCC
Internal bar code:TACATAGGGACATCACTCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCAGCAAAGACCCTAA
Suggested primer 2:GAGTACCGCTAGCGTTACCC