Insertion junction: CLIP2.050288_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050288
Chromosome:chromosome 8
Location:1392836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACATCGCGGGCACACGAGCCACCAAACGGAATCACCACTTGCAGGC
Internal bar code:ACTCTCGTACGGCCTTTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3342
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTACCGCTAGCGTTACCC
Suggested primer 2:CTCGGCAGCAAAGACCCTAA