Insertion junction: CLIP2.050290_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050290
Chromosome:chromosome 11
Location:2046924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAACGGAGTGGTAAGATCACAAGTGTGAGATGCCGAAGTCCAGCGG
Internal bar code:GATAGATGAGTTGTTATAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTCGATTACCGCAGCG
Suggested primer 2:GCGAAGAAGGTGGACAGGAA