Insertion junction: CLIP2.050294_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050294
Chromosome:chromosome 10
Location:4058874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447800 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACGTCTCGCGTAAGTCGGTGGACCTGGCGTCTGCCCAGTGCGTGGCG
Internal bar code:AATGGGCTAGGAAGCTCTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGGGTAAGAGGGTGTTC
Suggested primer 2:CGATGACTTAACGCTGCTGC