Insertion junction: CLIP2.050299_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050299
Chromosome:chromosome 11
Location:2341508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801293 (1 of 140) IPR005135 - Endonuclease/exonuclease/phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGCCCCCCACACCACGCATGCAATAAGTTGCGTAGTCGCCGGTAAT
Internal bar code:TGCTTAACGTAATCATTAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4210
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGAGCAACTCCACAGCC
Suggested primer 2:CTGCGTGTCCCAGTAGTTGT