Insertion junction: CLIP2.050305_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050305
Chromosome:chromosome 8
Location:3341268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377450 (1 of 1) PTHR10997:SF9 - IMPORTIN-9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGGGTCGGGGTTGGTTGGTTGTTGGGGGTTGGTCGTTGGCACCGT
Internal bar code:TTTGATCTTTGGGCGCCTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:382
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTAACCCAACTTCCCTT
Suggested primer 2:GTACATCACCATAGGGGCGG