Insertion junction: CLIP2.050316_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050316
Chromosome:chromosome 4
Location:173436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216902 ODA16,DAW1,WDR69 (1 of 1) PTHR22847//PTHR22847:SF464 - WD40 REPEAT PROTEIN // DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1; Outer Arm Dynein-IFT adaptor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCCGGGAGCTGCCCGCGGAAGGCGTGGCCCATGAATCCCCAGTTCG
Internal bar code:TGGTAATATAATTACACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:80
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACATGAGCACTGAGGG
Suggested primer 2:CTCAGCGCGTTTTCATCTCG