Insertion junction: CLIP2.050323_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050323
Chromosome:chromosome 12
Location:3908087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801398 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCTCCGCTTACCTTCGTACGCCGCTCCAATGCGCTGGGCGTCCTCG
Internal bar code:AGTTAATGAGTTTGTCTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2776
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCTAGGCACGTGCAGTC
Suggested primer 2:GCAGAGGTACCAGGAGAGGA