Insertion junction: CLIP2.050323_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050323
Chromosome:chromosome 12
Location:3908088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801398 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGGTTAGTTGGACTTTGTCGATTGCAGCCGTAGCTCTTTTACGAGG
Internal bar code:GTACGTGTGGATCGAAATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2668
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGTACCAGGAGAGGA
Suggested primer 2:ATAGCTAGGCACGTGCAGTC