Insertion junction: CLIP2.050327_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050327
Chromosome:chromosome 13
Location:2798339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATGCAGGAAGTAGCATGCCTAGGAAAGTGAGGATGAACGGGCAATG
Internal bar code:AAGGGGGTCTCATGTTTCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5789
LEAP-Seq percent confirming:94.0299
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCAGCTGCTTGTAGGGC
Suggested primer 2:CCGTTGCATTACGCTAGTGC