Insertion junction: CLIP2.050331_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050331
Chromosome:chromosome 5
Location:2976388
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g230804 SNF2 SNF2-related ATPase; (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCACCCGCTCTCTGTCCCGCCACCTGTAACCGAAAACGCACCCTCC
Internal bar code:CGCGCACTTTTCTATCGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATTGTGTTCACGCAGTT
Suggested primer 2:CTCACCGTGTCCATGACCAA