Insertion junction: CLIP2.050338_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050338
Chromosome:chromosome 4
Location:3563118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228400 WRK1 (1 of 1) PF03106 - WRKY DNA -binding domain (WRKY); WRKY family transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCACCGCCAGTGTTCAGTGCCGTCGACATCACGGTGCCCAACGGATT
Internal bar code:GTTGGAGGTAGCTAGTAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4435
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGAAAGGGGCCCGACTA
Suggested primer 2:AAGATTGTTGAGCGCTCCGA