Insertion junction: CLIP2.050342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050342
Chromosome:chromosome 3
Location:4629726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176900 (1 of 2) 2.1.1.282//2.5.1.114 - tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))- methyltransferase / tRNA-yW synthesizing enzyme-3 // tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase / tRNA-yW synthesizing enzyme-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGAGAGTGCCAGGGAGGTGGAGGTGGCGTAGGTGAGCAGGTGGTG
Internal bar code:AATGTCCTGCTGCGTCGACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1219
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTAATACGCAGGCCGCAG
Suggested primer 2:CTTGGGACAGGCGATGACTT