Insertion junction: CLIP2.050345_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050345
Chromosome:chromosome 6
Location:5379788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCTCCTTGTCGGCGGCAGCAATGGCGCGCCGGCGAGCTTCAAGCGT
Internal bar code:GAGCAGTGTTTGACAAACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2909
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTGTCGGTTGCATTTT
Suggested primer 2:GTGTTTACAGCCTGCACTGC